| MirGeneDB ID | Adi-Novel-4 |
|---|
| Family name |
ADI-NOVEL-4 (all species) |
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| Seed |
GGGUGUC |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. digitifera
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| Node of Origin (family) |
A. digitifera
|
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF971314.1: 107382-107434 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UACGUAUGUAGAAAAUGUGGGAUGAGUGCCUGGGUGUCAUCUAUUAUGUUUUUGCUUGUUAAAACAUAAAAGAUGGCACCAGACAUUCAUCUCAAAAACUUGGGAACAUUCCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UACGUAUGUAGAAAAUG--| C G A UGC
UGGGAUGAGUG CUGG UGUCAUCU UUAUGUUUU U
ACUCUACUUAC GACC ACGGUAGA AAUACAAAA U
UCCUUACAAGGGUUCAAAA^ A - A UUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Mature sequence |
Adi-Novel-4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGGGUGUCAUCUAUUAUGUUUU -22
Get sequence
|
|---|
| Star sequence |
Adi-Novel-4_3p* |
| mirBase accession | None |
|---|
| Sequence |
32- AACAUAAAAGAUGGCACCAGA -53
Get sequence
|
|---|
