| MirGeneDB ID | Adi-Novel-5 |
|---|
| Family name |
ADI-NOVEL-5 (all species) |
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| Seed |
CAUAACA |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. digitifera
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| Node of Origin (family) |
A. digitifera
|
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF970755.1: 30166-30219 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGGGAACCAAGAAUACCAGUGAGGUUAAAAAUGAUCCCUGCUCUUAUGAAUGUAAUUAGGUUCAUAACAGUGAGGACCAUUCUUGACUUCAUUUCAUUUCUAUUGGUCAUGUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGGGAACCAAGAAUACC--| A A CU C GUA
AGUGAGGUUAA AAUG UCC GCU UUAUGAAU A
UUACUUCAGUU UUAC AGG UGA AAUACUUG U
AUGUACUGGUUAUCUUUACU^ C C AG C GAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Star sequence |
Adi-Novel-5_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAUGAUCCCUGCUCUUAUGAAU -22
Get sequence
|
|---|
| Mature sequence |
Adi-Novel-5_3p |
| mirBase accession | None |
|---|
| Sequence |
32- UCAUAACAGUGAGGACCAUUCU -54
Get sequence
|
|---|
