| MirGeneDB ID | Adi-Novel-6-P1 |
|---|
| Family name |
ADI-NOVEL-6 (all species) |
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| Seed |
CUGCGUU |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
Adi-Novel-6-P2
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| Orthologues |
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| Node of Origin (locus) |
A. digitifera
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| Node of Origin (family) |
A. digitifera
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF970752.1: 428014-428066 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUACGUCACUGAAAAUCGGCCAUAGUCACAUUUCACUAGAUAAGCGCUAACUGUUAUUGUUCUGCGUUAUCGGUGAAAUUGUAACUGUUGCCUCCUAUUGCUUUUGCUUUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUACGUCACUGAAAAUC-- C C -| A G U- UGU
GGC AUAGU AC AUUUCACU GAUAA CGC AAC \
CCG UGUCA UG UAAAGUGG CUAUU GCG UUG U
ACUUUCGUUUUCGUUAUCCU U A U^ - - UC UUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Star sequence |
Adi-Novel-6-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUUUCACUAGAUAAGCGCUAAC -22
Get sequence
|
|---|
| Mature sequence |
Adi-Novel-6-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
31- UCUGCGUUAUCGGUGAAAUUGU -53
Get sequence
|
|---|
