MirGeneDB ID | Adi-Novel-8 |
Family name |
ADI-NOVEL-8 (all species) |
Seed |
CUGCCAA |
Species |
Stony coral (Acropora digitifera) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
A. digitifera
|
Node of Origin (family) |
A. digitifera
|
Genome context (GCA_000222465.2_Adig_1.1_genomic) |
DF971289.1: 135603-135655 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUUUCUUGGAUUUUAAAGAACUCUGUGCUUUCUGCCAAUCGUCAGACAAACUACUUUGAUGGUUUCCUGGCGGUCGACAGAGUGGACAGAAUUUCUGUUGGCGAGAGUUGUUC
Get precursor sequence
|
Structure | 10 20 30 40 50
UUUUCUUGGAUUUUAAA- C-| G - CCA AC ACU
GAA UCUGU CU UUCUG AUCGUCAG AAACU U
CUU AGACA GG GAGAC UGGCGGUC UUUGG U
CUUGUUGAGAGCGGUUGU UA^ - U AGC C- UAG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Dicer cut +1 on both arms. |
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Adi-Novel-8_5p |
mirBase accession | None |
Sequence |
0- UCUGCCAAUCGUCAGACAAACU -22
Get sequence
|
Star sequence |
Adi-Novel-8_3p* |
mirBase accession | None |
Sequence |
32- UUUCCUGGCGGUCGACAGAGU -53
Get sequence
|