| MirGeneDB ID | Aga-Mir-10378 |
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| Family name |
MIR-10378 (all species) |
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| Seed |
CUAUCAU |
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| Species |
African malaria mosquito (Anopheles gambiae) |
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| MiRBase ID |
aga-mir-10378
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. gambiae
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| Node of Origin (family) |
A. gambiae
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Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064601.1: 18576514-18576586 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAAUGAUAGCAUAAUACCGGUGAUCGGUUUCGUGGUACUCUUGUGGUAAGGAGUUUCGCACUAGCGGCGGCACCAAGCAUCUCUAUCAUUUGAGUACCAUGAAGUCGGCACUGGCCGGCACCGUGGCACUCCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UAAUGAUAGCAUAAUAC---| A GU UU AG GUUUCGCACUAGC
CGGUG UCG UUCGUGGUACUC GUGGUA GA \
GUCAC GGC AAGUACCAUGAG UACUAU CU G
ACCUCACGGUGCCACGGCCG^ - UG UU CU ACGAACCACGGCG
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
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| Star sequence |
Aga-Mir-10378_5p* |
| mirBase accession | MIMAT0041582 |
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| Sequence |
0- CGUGGUACUCUUGUGGUAAGGA -22
Get sequence
|
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| Mature sequence |
Aga-Mir-10378_3p |
| mirBase accession | MIMAT0041583 |
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| Sequence |
51- UCUAUCAUUUGAGUACCAUGAA -73
Get sequence
|
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