MirGeneDB ID | Aga-Novel-1 |
Family name |
AGA-NOVEL-1 (all species) |
Seed |
CUUGAUC |
Species |
African malaria mosquito (Anopheles gambiae) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
A. gambiae
|
Node of Origin (family) |
A. gambiae
|
Genome context (GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064602.1: 524323-524384 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGGUUGUAGUUCAUGUUGGCUGUGAAUAUCCCUUGAUCGUGUUCGCUACUGCUAUGAUGCUUUGUAAAGUAGUACGAAUACGUACGAGGGAUAUCUGCAUUCCUAGUUCCGAAUGCAACGAU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGGUUGUAGUUCAUGUU-- C-| GA AU C AUGAUG
GG UGU AUAUCCCUUG CGUGUUCG UACUGCU C
CC ACG UAUAGGGAGC GCAUAAGC AUGAUGA U
UAGCAACGUAAGCCUUGAU UU^ UC AU - AAUGUU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
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Mature sequence |
Aga-Novel-1_5p |
mirBase accession | None |
Sequence |
0- CCUUGAUCGUGUUCGCUACUGCU -23
Get sequence
|
Co-mature sequence |
Aga-Novel-1_3p |
mirBase accession | None |
Sequence |
39- UAGUACGAAUACGUACGAGGGAU -62
Get sequence
|