| MirGeneDB ID | Aga-Novel-1 |
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| Family name |
AGA-NOVEL-1 (all species) |
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| Seed |
CUUGAUC |
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| Species |
African malaria mosquito (Anopheles gambiae) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. gambiae
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| Node of Origin (family) |
A. gambiae
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Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064602.1: 524323-524384 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGGUUGUAGUUCAUGUUGGCUGUGAAUAUCCCUUGAUCGUGUUCGCUACUGCUAUGAUGCUUUGUAAAGUAGUACGAAUACGUACGAGGGAUAUCUGCAUUCCUAGUUCCGAAUGCAACGAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGGUUGUAGUUCAUGUU-- C-| GA AU C AUGAUG
GG UGU AUAUCCCUUG CGUGUUCG UACUGCU C
CC ACG UAUAGGGAGC GCAUAAGC AUGAUGA U
UAGCAACGUAAGCCUUGAU UU^ UC AU - AAUGUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Mature sequence |
Aga-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- CCUUGAUCGUGUUCGCUACUGCU -23
Get sequence
|
|---|
| Co-mature sequence |
Aga-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAGUACGAAUACGUACGAGGGAU -62
Get sequence
|
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