MirGeneDB 3.0

MirGeneDB ID

Aga-Novel-1

Family name AGA-NOVEL-1 (all species)
Seed CUUGAUC
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) A. gambiae
Node of Origin (family) A. gambiae
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064602.1: 524323-524384 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGGUUGUAGUUCAUGUUGGCUGUGAAUAUCCCUUGAUCGUGUUCGCUACUGCUAUGAUGCUUUGUAAAGUAGUACGAAUACGUACGAGGGAUAUCUGCAUUCCUAGUUCCGAAUGCAACGAU
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Structure
        10          20         30        40        50        60
CGGUUGUAGUUCAUGUU--  C-|  GA          AU        C       AUGAUG 
                   GG  UGU  AUAUCCCUUG  CGUGUUCG UACUGCU      C
                   CC  ACG  UAUAGGGAGC  GCAUAAGC AUGAUGA      U
UAGCAACGUAAGCCUUGAU  UU^  UC          AU        -       AAUGUU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Mature sequence

Aga-Novel-1_5p

mirBase accessionNone
Sequence
0- CCUUGAUCGUGUUCGCUACUGCU -23
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Co-mature sequence

Aga-Novel-1_3p

mirBase accessionNone
Sequence
39- UAGUACGAAUACGUACGAGGGAU -62
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