MirGeneDB ID | Agr-Mir-12591 |
Family name |
MIR-12591 (all species) |
Seed |
UCCCUGU |
Species |
West Indian fuzzy chiton (Acanthopleura granulata ) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Mom-Mir-12591
|
Node of Origin (locus) |
Polyplacophora
|
Node of Origin (family) |
Polyplacophora
|
Genome context (GCA_016165875.1_ASM1616587v1_Acanthopleura_granula) |
JABBOT010000003.1: 2630942-2631003 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACCGAUUGAAGGAAUUGCCUUGUGCCGUCAAUCCCUGUUCCCAAGCCAUCAGAGGAAGUUGAAGAUGAUGGCUUGCGAUUGAGCAGGGAUUGGGAGUGUAAGGCUUUUCAACACACUAUACA
Get precursor sequence
|
Structure | 10 20 30 40 50
ACCGAUUGAAGGAAUUG-- UG CG C----| GAGGAA
CCUUG C UCAAUCCCUGUUC CAAGCCAUCA G
GGAAU G GGUUAGGGACGAG GUUCGGUAGU U
ACAUAUCACACAACUUUUC GU AG UUAGC^ AGAAGU
120 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Agr-Mir-12591_5p |
mirBase accession | None |
Sequence |
0- AUCCCUGUUCCCAAGCCAUCA -21
Get sequence
|
Star sequence |
Agr-Mir-12591_3p* |
mirBase accession | None |
Sequence |
37- AUGGCUUGCGAUUGAGCAGGGAUUG -62
Get sequence
|