MirGeneDB 3.0

MirGeneDB ID

Agr-Mir-12592

Family name MIR-12592 (all species)
Seed UUGACAU
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues
Orthologues Mom-Mir-12592 
Node of Origin (locus) Polyplacophora
Node of Origin (family) Polyplacophora
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)
JABBOT010000004.1: 28923677-28923736 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAGAAAAGUGAGACCUCUCGUUGUCACGCGACGGGACUUGAUGGUUAGAUCGCUGUUAUAAACUAGAUUGACAUCAAGUCUCGCCAUGUGAUCGCGAGAUUUGACCUCCAUCCACUAC
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Structure
        10          20        30        40        50        60
CAGAGAAAAGUGAGACC--|     U      CGA            GUUA    GCUGUU 
                   UCUCGU GUCACG   CGGGACUUGAUG    GAUC      A
                   AGAGCG UAGUGU   GCUCUGAACUAC    UUAG      U
CAUCACCUACCUCCAGUUU^     C      ACC            AG--    AUCAAA 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Agr-Mir-12592_5p*

mirBase accessionNone
Sequence
0- CGACGGGACUUGAUGGUUAGAUCG -24
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Mature sequence

Agr-Mir-12592_3p

mirBase accessionNone
Sequence
38- AUUGACAUCAAGUCUCGCCAUG -60
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