| MirGeneDB ID | Asp-Mir-2026-P1a |
|---|
| Family name |
MIR-2026 (all species) |
|---|
| Seed |
AAUCAGU |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
|---|
| Paralogues |
Asp-Mir-2026-P1b
Asp-Mir-2026-P2-v1
Asp-Mir-2026-P2-v2
|
|---|
| Orthologues |
Nve-Mir-2026
|
|---|
| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Anenthemonae
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000577.1: 179450658-179450708 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UGACAGGGAAUAAGUUUCUGAGUCCCUCCACUUCAAAUAUCUACUGAUGGAAUUUAAUUCAAUCAGUGGAUAUUUGAAAUUGUGGGUCCCAGACUAUGCCGAGGAACAACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGACAGGGAAUAAGUUU--| AGU UCCAC G UU
CUG CCC UUCAAAUAUCUACUGAU GAA \
GAC GGG AAGUUUAUAGGUGACUA CUU U
GCAACAAGGAGCCGUAUCA^ CCU UGUUA A AA
. 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Asp-Mir-2026-P1a_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CUUCAAAUAUCUACUGAUGGAA -22
Get sequence
|
|---|
| Mature sequence |
Asp-Mir-2026-P1a_3p |
| mirBase accession | None |
|---|
| Sequence |
29- CAAUCAGUGGAUAUUUGAAAUU -51
Get sequence
|
|---|
