MirGeneDB ID | Asp-Mir-2026-P1a |
Family name |
MIR-2026 (all species) |
Seed |
AAUCAGU |
Species |
Deep-sea anemone (Actinernus sp.) |
MiRBase ID |
|
Paralogues |
Asp-Mir-2026-P1b
Asp-Mir-2026-P2-v1
Asp-Mir-2026-P2-v2
|
Orthologues |
Nve-Mir-2026
|
Node of Origin (locus) |
Actinernus sp.
|
Node of Origin (family) |
Anenthemonae
|
Genome context (GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000577.1: 179450658-179450708 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGACAGGGAAUAAGUUUCUGAGUCCCUCCACUUCAAAUAUCUACUGAUGGAAUUUAAUUCAAUCAGUGGAUAUUUGAAAUUGUGGGUCCCAGACUAUGCCGAGGAACAACG
Get precursor sequence
|
Structure | 10 20 30 40 50
UGACAGGGAAUAAGUUU--| AGU UCCAC G UU
CUG CCC UUCAAAUAUCUACUGAU GAA \
GAC GGG AAGUUUAUAGGUGACUA CUU U
GCAACAAGGAGCCGUAUCA^ CCU UGUUA A AA
. 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Asp-Mir-2026-P1a_5p* |
mirBase accession | None |
Sequence |
0- CUUCAAAUAUCUACUGAUGGAA -22
Get sequence
|
Mature sequence |
Asp-Mir-2026-P1a_3p |
mirBase accession | None |
Sequence |
29- CAAUCAGUGGAUAUUUGAAAUU -51
Get sequence
|