| MirGeneDB ID | Asp-Novel-2-P1 |
|---|
| Family name |
ASP-NOVEL-2 (all species) |
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| Seed |
UAGAACC |
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| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
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| Paralogues |
Asp-Novel-2-P2
Asp-Novel-2-P3
|
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| Orthologues |
|
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| Node of Origin (locus) |
Actinernus sp.
|
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| Node of Origin (family) |
Actinernus sp.
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Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001634.1: 69034566-69034619 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAGCUUGGAAAUAACAUCUGAGGGAAGAUUUAGAACCCAGCUGGGUUUCACUUUUAGGAAUGAAAGCCAGUUCGGUUCCAUACUUAGAACCCAGCUGGGUUUCACUUUUAGGAAUGAAAGCCAGUUCGGUUCCAUACCAUCACUCAGACAUCUGUCCACAAAGUGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCAGCUUGGAAAUAACA-- -| AAGAUUUAGAACCCAGCUGGGUUUCACUUU
UCUGAG GG \
AGACUC CU U
GAGUGAAACACCUGUCUAC A^ ACCAUACCUUGGCUUGACCGAAAGUAAGGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Asp-Novel-2-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
31- UGAAAGCCAGUUCGGUUCCAUAC -54
Get sequence
|
|---|
| Mature sequence |
Asp-Novel-2-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGAACCCAGCUGGGUUUCACU -23
Get sequence
|
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