| MirGeneDB ID | Asp-Novel-3 |
|---|
| Family name |
ASP-NOVEL-3 (all species) |
|---|
| Seed |
UUCGUGA |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
|
|---|
| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Actinernus sp.
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001634.1: 95067664-95067715 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUCCCAUAUCAUUCCAAGUGUAUGACAAGAUUUCGUGAAUAUGUCAUCAGUCUUUCAAAGACUGAUGAGAUAUUUACUAAUCUUGUCAUUAACAACAUGGGAGAAAGCCAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCCCAUAUCAUUCCAA--| GU UC G UU
GU AUGACAAGAUU GUGAAUAU UCAUCAGUCU \
CA UACUGUUCUAA CAUUUAUA AGUAGUCAGA C
UGACCGAAAGAGGGUACAA^ AU U- G AA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Asp-Novel-3_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUCGUGAAUAUGUCAUCAGUCU -23
Get sequence
|
|---|
| Star sequence |
Asp-Novel-3_3p* |
| mirBase accession | None |
|---|
| Sequence |
30- ACUGAUGAGAUAUUUACUAAUC -52
Get sequence
|
|---|
