| MirGeneDB ID | Asp-Novel-5 |
|---|
| Family name |
ASP-NOVEL-5 (all species) |
|---|
| Seed |
UUUUGAG |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Actinernus sp.
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000064.1: 9055898-9055950 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAUUUGGCUGCAGAGUAACCAGAUGACUGGAAACGUGUGCGAUCAAAUUUAGUCUACACCUAAUUUUGAGCCCACACGUUUCCAGUCGUACUAUAACACAAGAAAAGGGAGUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAUUUGGCUGCAGAGUAACC- -| CGA U GUCU
AG AUGACUGGAAACGUGUG UCAAA UUA \
UC UGCUGACCUUUGCACAC AGUUU AAU A
GUGAGGGAAAAGAACACAAUA A^ CCG U CCAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Asp-Novel-5_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAACGUGUGCGAUCAAAUUUA -21
Get sequence
|
|---|
| Mature sequence |
Asp-Novel-5_3p |
| mirBase accession | None |
|---|
| Sequence |
32- AUUUUGAGCCCACACGUUUCC -53
Get sequence
|
|---|
