| MirGeneDB ID | Asp-Novel-6 |
|---|
| Family name |
ASP-NOVEL-6 (all species) |
|---|
| Seed |
CGGUCUC |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Actinernus sp.
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000019.1: 4251850-4251901 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GACAGCAUGGUUUAAUGCCUAGUUUUGUUCACGGUCUCUCUCUCUGAGCCUUAUUUAGUAACGCUAGGAAGGGAUACCGGGAACGCGACUUGGACAAAUUCUCCCAGCCAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GACAGCAUGGUUUAAUG--| U U A C CU G C UU
CC AGUU UGUUC CGGU UCUCU CU AGC UUA \
GG UCAG GCAAG GCCA AGGGA GA UCG AAU U
GGACCGACCCUCUUAAACA^ U C G U AG - C GA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Asp-Novel-6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACGGUCUCUCUCUCUGAGCCUUA -23
Get sequence
|
|---|
| Star sequence |
Asp-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
30- ACGCUAGGAAGGGAUACCGGGA -52
Get sequence
|
|---|
