| MirGeneDB ID | Asu-Novel-1 |
|---|---|
| Family name | ASU-NOVEL-1 (all species) |
| Seed | CUUCGAC |
| Species | Large roundworm (Ascaris suum) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | A.suum |
| Node of Origin (family) | A.suum |
| Genome context (ASU_PRJNA80881_plustraces) |
Scaffold122: 2002114-2002167 [+] |
| Precursor (pre-Mir +30nt flank) | UGCGCAUUCUGGCAGCACCUCGCGAGGUGUUCUUCGACAGUAUGGCCAAAGCUGGAAACAAGCUGCAGCCGGCUGUCGAAAAAUACCUAGGAGGCUUUUUACAAAGCGCUGUAGGet precursor sequence |
| Structure | 10 20 30 40 50 UGCGCAUUCUGGCAGCA---| GCG C A CAA GGA CCUC AGGUGUU UUCGACAGU UGGC AGCU \ GGAG UCCAUAA AAGCUGUCG GCCG UCGA A GAUGUCGCGAAACAUUUUUC^ GA- A - ACG ACA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Asu-Novel-1_5p |
| mirBase accession | None |
| Sequence |
0- UCUUCGACAGUAUGGCCAAAGCU -23
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|
| Star sequence | Asu-Novel-1_3p* |
| mirBase accession | None |
| Sequence |
33- UGCAGCCGGCUGUCGAAAAAU -54
Get sequence
|
