| MirGeneDB ID | Asu-Novel-2 |
|---|
| Family name |
ASU-NOVEL-2 (all species) |
|---|
| Seed |
UUUGAUC |
|---|
| Species |
Large roundworm (Ascaris suum) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
A.suum
|
|---|
| Node of Origin (family) |
A.suum
|
|---|
Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold142: 201065-201123 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCAUUUUGAUCUCUAUUUUGACCUAUUUUCAUUUGAUCGAUCUUCAUUCUGAUAAAAGUGAAAAUCAAAAUGAAGACUGUUCAAAAUGAAAAUAGAUCAAAACGAAAGUAGAUGAAAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAUUUUGAUCUCUAUU-- C -| U A C UAAAA
UUGA CUAUUUUCA UUUGA CG UCUUCAUU UGA G
AACU GAUAAAAGU AAACU GU AGAAGUAA ACU U
CAAAAGUAGAUGAAAGCAA A A^ U C A AAAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ce |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Asu-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUUUGAUCGAUCUUCAUUCUGA -22
Get sequence
|
|---|
| Co-mature sequence |
Asu-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
36- AAAAUGAAGACUGUUCAAAAUGA -59
Get sequence
|
|---|
