| MirGeneDB ID | Asu-Novel-4 |
|---|---|
| Family name | ASU-NOVEL-4 (all species) |
| Seed | ACAGUCU |
| Species | Large roundworm (Ascaris suum) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | A.suum |
| Node of Origin (family) | A.suum |
| Genome context (ASU_PRJNA80881_plustraces) |
Scaffold656: 229799-229855 [+] |
| Precursor (pre-Mir +30nt flank) | CUGGCCGGUAAGGUGAAGUUCAGUCCGCUGUACAGUCUCGAGGACGAACUAUGUGCAGGAGGACAUUUUCAUCCUCGAGACUGUGCAACGAACUGAACUUGUUUCCUUUGACAGAAUGet precursor sequence |
| Structure | 10 20 30 40 50 CUGGCCGGUAAGGUGAA--| C C C CU UGCA GUUCAGU CG UGUACAGUCUCGAGGA GAA AUG G CAAGUCA GC ACGUGUCAGAGCUCCU CUU UAC G UAAGACAGUUUCCUUUGUU^ A A A U- AGGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Asu-Novel-4_5p |
| mirBase accession | None |
| Sequence |
0- UACAGUCUCGAGGACGAACUAUG -23
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|
| Star sequence | Asu-Novel-4_3p* |
| mirBase accession | None |
| Sequence |
35- UUUUCAUCCUCGAGACUGUGCA -57
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|
