MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-153-P21

Family name MIR-153 (all species)
Seed UGCAUAG
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-153-P20 
Orthologues Agr-Mir-153  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Cin-Mir-153  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dpu-Mir-153  Eba-Mir-153  Egr-Mir-153  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Isc-Mir-153  Lan-Mir-153  Lgi-Mir-153  Llo-Mir-153  Mgi-Mir-153  Mom-Mir-153  Npo-Mir-153  Obi-Mir-153  Ofu-Mir-153  Ovu-Mir-153  Pau-Mir-153  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Pve-Mir-153  Rph-Mir-153  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spu-Mir-153  Tur-Mir-153  War-Mir-153  Xbo-Mir-153 
Node of Origin (locus) A. vaga
Node of Origin (family) Bilateria
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 12603570-12603626 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGUUAAUGCACCGAUAGUUCUUUUUGGGCAGCUUUUGAUAAUUAUGCAAUUUGUAAUCAAUAAUUGCAUAGUCACAAAAGCGACCUGAUGAGAAUGAUUAAUUUUUACAAUUAAU
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Structure
        10          20        30        40        50        
CCAGUUAAUGCACCGAUA--|     U UG  CA       AUA           UGUA 
                    GUUCUU U  GG  GCUUUUG   AUUAUGCAAUU    A
                    UAAGAG A  CC  CGAAAAC   UGAUACGUUAA    U
UAAUUAACAUUUUUAAUUAG^     U GU  AG       AC-           UAAC 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Sr Sr
Star sequence

Ava-Mir-153-P21_5p*
mirBase accessionNone
Sequence 
0- CAGCUUUUGAUAAUUAUGCAAUU -23
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Mature sequence

Ava-Mir-153-P21_3p
mirBase accessionNone
Sequence 
35- UUGCAUAGUCACAAAAGCGACC -57
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