| MirGeneDB ID | Ava-Novel-1 |
|---|---|
| Family name | AVA-NOVEL-1 (all species) |
| Seed | UUGGCAC |
| Species | Bdelloid rotifer (Adineta vaga) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | A. vaga |
| Node of Origin (family) | A. vaga |
| Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075495.1: 8323034-8323098 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | AGAUGAUUUAUUCCAAGUGAAUUAUCGUUUUUUGGCACAAAUUGAAAUUCAUUUUGUUAAUAAUGAUAUCGAUGAGUUUCAUAUUGUGUCGAAAUCGAUAAAUUUAAAACGGAUUUUACACAUUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGAUGAUUUAUUCCAAG-- -| UU AU UUGUUAAU UGAA UUAUCG UUUUGGCACAA UGAAAUUCAUU \ AUUU AAUAGC AAAGCUGUGUU ACUUUGAGUAG A UUUACACAUUUUAGGCAAA A^ U- AU CUAUAGUA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Ava-Novel-1_5p |
| mirBase accession | None |
| Sequence |
0- UUUGGCACAAAUUGAAAUUCAUU -23
Get sequence
|
| Star sequence | Ava-Novel-1_3p* |
| mirBase accession | None |
| Sequence |
42- UGAGUUUCAUAUUGUGUCGAAAU -65
Get sequence
|
