| MirGeneDB ID | Ava-Novel-4 |
|---|---|
| Family name | AVA-NOVEL-4 (all species) |
| Seed | AACCUUG |
| Species | Bdelloid rotifer (Adineta vaga) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | A. vaga |
| Node of Origin (family) | A. vaga |
| Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075495.1: 11524721-11524813 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | AUCGUUUGAACUUUAUCGAAUUUAGUAAAUAGCUCAUGUAAUCAAGGUUACGCUAUGAAGAAGACGAAAAUGUUUAUAUACUUUGUCUUUGUUCAUCACCGCAACCUUGAUCACAUGAGCUAUUAACUUUUUUCGUAAAGAUUUUAUCUACAUGet precursor sequence |
| Structure | 10 20 30 40 50 60 70 AUCGUUUGAACUUUAUC--| UUU A A A CUAUGAAGAAGACGAAAAUGUUU GAA AGU AAUAGCUCAUGU AUCAAGGUU CG \ CUU UCA UUAUCGAGUACA UAGUUCCAA GC A UACAUCUAUUUUAGAAAUG^ UUU A C C CACUACUUGUUUCUGUUUCAUAU 150 140 130 120 110 100 90 80 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Ava-Novel-4_5p* |
| mirBase accession | None |
| Sequence |
0- AGCUCAUGUAAUCAAGGUUACG -22
Get sequence
|
| Mature sequence | Ava-Novel-4_3p |
| mirBase accession | None |
| Sequence |
71- CAACCUUGAUCACAUGAGCUAU -93
Get sequence
|
