| MirGeneDB ID | Ava-Novel-7 |
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| Family name |
AVA-NOVEL-7 (all species) |
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| Seed |
CGGUGGG |
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| Species |
Bdelloid rotifer (Adineta vaga) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. vaga
|
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| Node of Origin (family) |
A. vaga
|
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Genome context
(GCA_021613535.1_ASM2161353v1_AVA) |
CP075497.1: 8438398-8438462 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAACAUAAUGAUUUGAGGCAUCUGCUCAUGAACGACAUAUCCACACGACGAUCUUGUUAUUGAUUGAAACUGAUCGGUGGGAUAUUUCAUUCAUUAGCAAUAGAAAAUCUUCGAUAUGAACUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGAACAUAAUGAUUUGAGGCAUC--| C C C A GA UUGUUAUU
UGCU AUGAA GA AUAUCC CAC CGAUC G
ACGA UACUU CU UAUAGG GUG GCUAG A
UUUCAAGUAUAGCUUCUAAAAGAUA^ U A U - -- UCAAAGUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Ava-Novel-7_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GAACGACAUAUCCACACGACGAUC -24
Get sequence
|
|---|
| Mature sequence |
Ava-Novel-7_3p |
| mirBase accession | None |
|---|
| Sequence |
44- UCGGUGGGAUAUUUCAUUCAU -65
Get sequence
|
|---|
