| MirGeneDB ID | Ava-Novel-9 |
|---|---|
| Family name | AVA-NOVEL-9 (all species) |
| Seed | GUAUUCU |
| Species | Bdelloid rotifer (Adineta vaga) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | A. vaga |
| Node of Origin (family) | A. vaga |
| Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075497.1: 9654906-9654964 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | CUUCUCUAAAUAUUAUUUCGUAAAACUAAGUGUAUUCUCAAGCACUAGUAAUCGUAUAUGAUGUUUUAUUAUUGCUUGAGAGUAUUCCUUAACAUUGUACGAUACAUCAUCGAUCAUGGGet precursor sequence |
| Structure | 10 20 30 40 50 CUUCUCUAAAUAUUAUUU AAAC-- U-| C UCGUAU CGUA UAAG GUAUUCUCAAGCA UAGUAA A GCAU AUUC UAUGAGAGUUCGU AUUAUU U GGUACUAGCUACUACAUA GUUACA CU^ U UUGUAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Ava-Novel-9_5p |
| mirBase accession | None |
| Sequence |
0- UGUAUUCUCAAGCACUAGUAA -21
Get sequence
|
| Star sequence | Ava-Novel-9_3p* |
| mirBase accession | None |
| Sequence |
37- AUUAUUGCUUGAGAGUAUUCCU -59
Get sequence
|
