MirGeneDB ID | Bge-Mir-153-P17 |
Family name |
MIR-153 (all species) |
Seed |
CAUUUUU |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
|
Paralogues |
Bge-Mir-153-P16
|
Orthologues |
Asu-Mir-153
Bfl-Mir-153
Bla-Mir-153
Bpl-Mir-153
Cgi-Mir-153
Cin-Mir-153
Csc-Mir-153-P17a
Csc-Mir-153-P17b
Cte-Mir-153
Dma-Mir-153
Dpu-Mir-153
Isc-Mir-153
Lan-Mir-153
Lgi-Mir-153
Npo-Mir-153
Obi-Mir-153
Ovu-Mir-153
Pfl-Mir-153
Pmi-Mir-153
Sko-Mir-153
Sme-Mir-153
Spu-Mir-153
Xbo-Mir-153
|
Node of Origin (locus) |
B. germanica
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Node of Origin (family) |
Bilateria
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Genome context (Bger_2.0) |
KZ614489.1: 899330-899388 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CUCAUCGCUUCCUGCAGAAGGCUCCUCUAAUCAUUUUUGCAAUUACAGCAAUUGUGUAAUUUAACAAUUGCAUAGUAGCAAAAGUGAUUGGAGGGCUGUACUAGCACCUGCCGCUGUCA
Get precursor sequence
|
Structure | 10 20 30 40 50
CUCAUCGCUUCCUGCAGAA---| U A CA GUGUA
GGC CCUCUAAUCAUUUUUGC AUUA GCAAUU A
UCG GGAGGUUAGUGAAAACG UGAU CGUUAA U
ACUGUCGCCGUCCACGAUCAUG^ - A A- CAAUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
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Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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Mature sequence |
Bge-Mir-153-P17_5p |
mirBase accession | None |
Sequence |
0- UCAUUUUUGCAAUUACAGCAAUU -23
Get sequence
|
Star sequence |
Bge-Mir-153-P17_3p* (predicted) |
mirBase accession | None |
Sequence |
37- UUGCAUAGUAGCAAAAGUGAUU -59
Get sequence
|