| MirGeneDB ID | Bge-Novel-1-P2 |
|---|
| Family name |
BGE-NOVEL-1 (all species) |
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| Seed |
GUGAUGU |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Novel-1-P1
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614827.1: 26187-26245 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUUGAAGCAGCAAUACAGCUUUGGGCCAUGUGAUGUGCAUGUGGGCUUUCCGAAAUUUAACAGGUGGCCCACAAGUACAUCAUUAGCGACCAAGGUUGAAGAUAUAUGCAUCAUAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAUUGAAGCAGCAAUA-- --| CAU A UU GAAAU
CAGCUUUGG GC GUGAUGUGC UGUGGGCU CC \
GUUGGAACC CG UACUACAUG ACACCCGG GG U
UAAUACUACGUAUAUAGAA AG^ AU- A U- ACAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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| Mature sequence |
Bge-Novel-1-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUGAUGUGCAUGUGGGCUUUCC -23
Get sequence
|
|---|
| Star sequence |
Bge-Novel-1-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- UGGCCCACAAGUACAUCAUUAGC -59
Get sequence
|
|---|
