MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-11

Family name BGE-NOVEL-11 (all species)
Seed GGUCAUG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ614500.1: 96730-96787 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAGAACAUCAAUUAUACUGGUUUCUUUUUGGUCAUGACUUCAGCAAUUUUGUGAUUUUUUAUAAAAUGGCUAUUGUUAUGUCCUCGAAGCACCAGUUUCCCAGCAAGAAAGAUCGA
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Structure
        10           20        30        40        50        
UGAAGAACAUCAAUUAU---|     UU    UU  U      UUC   A     GUGAU 
                    ACUGGU  CUUU  GG CAUGAC   AGC AUUUU     U
                    UGACCA  GAAG  CC GUAUUG   UCG UAAAA     U
AGCUAGAAAGAACGACCCUU^     C-    CU  U      UUA   G     UAUUU 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Novel-11_5p

mirBase accessionNone
Sequence
0- UGGUCAUGACUUCAGCAAUUUU -22
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Star sequence

Bge-Novel-11_3p*

mirBase accessionNone
Sequence
36- AAUGGCUAUUGUUAUGUCCUCG -58
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