| MirGeneDB ID | Bge-Novel-16 |
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| Family name |
BGE-NOVEL-16 (all species) |
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| Seed |
CUGCGAC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614569.1: 131301-131358 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UACAAGUUAACAUGUGUAGCACAGUAGGAUUCUGCGACAAUUUACUGUUAGGUGGAAAUAAUUCUCUGACAGUCAUUUGUAGCAGUAUCUUCCUGUGUUCUAUCUCCUGAUGGAACAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UACAAGUUAACAUGUGU--| U U G UUU UGGAA
AGCACAG AGGAU CUGC ACAA ACUGUUAGG A
UUGUGUC UUCUA GACG UGUU UGACAGUCU U
UACAAGGUAGUCCUCUAUC^ C U A UAC CUUAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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| Mature sequence |
Bge-Novel-16_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGCGACAAUUUACUGUUAGG -22
Get sequence
|
|---|
| Star sequence |
Bge-Novel-16_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- UGACAGUCAUUUGUAGCAGUAU -58
Get sequence
|
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