| MirGeneDB ID | Bge-Novel-22 |
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| Family name |
BGE-NOVEL-22 (all species) |
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| Seed |
CGGACGA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ616280.1: 215071-215131 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCCCUGAAGAAGACAUGAAGCCUUUUCCCUCGGACGAAGUGCACUUAUUUACGUAGUUAUGAAUUUCCGUUAAGGGCACAUCGUUCGAGCAUAAGGGCUUUUAAUUCAUCGCAGGCAGGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGCCCUGAAGAAGACAU--| UCC A A UUU UAGUUA
GAAGCCUUU CUCGGACGA GUGC CUUA ACG U
UUUCGGGAA GAGCUUGCU CACG GAAU UGC G
GGGACGGACGCUACUUAAU^ UAC A G --- CUUUAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-22_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCGGACGAAGUGCACUUAUUUACGU -25
Get sequence
|
|---|
| Star sequence |
Bge-Novel-22_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- GUUAAGGGCACAUCGUUCGAGC -61
Get sequence
|
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