| MirGeneDB ID | Bla-Mir-2061 |
|---|
| Family name |
MIR-2061 (all species) |
|---|
| Seed |
UGCAUAG |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
|---|
| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bfl-Mir-2061
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000005: 2547635-2547693 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACAGGAGGAGAAACUCUGGUGGUUUUCCACGGGCAAUGUAUCUAGCGCAACACGUCAACUCUAGCUGUUGCAUAGGUACAUUGGUCAGUGGGAGCCCACCCCUUACAACGUCAGGUGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAGGAGGAGAAACUCU-- U -| G GC CGUCAA
GGUGG UUUCCAC GG CAAUGUAUCUA GCAACA \
CCACC GAGGGUG CU GUUACAUGGAU CGUUGU C
AAGUGGACUGCAACAUUCC C A^ G A- CGAUCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Bla-Mir-2061_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGGCAAUGUAUCUAGCGCAACA -22
Get sequence
|
|---|
| Mature sequence |
Bla-Mir-2061_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUGCAUAGGUACAUUGGUCAGU -59
Get sequence
|
|---|
