| MirGeneDB ID | Bla-Mir-4864 |
|---|
| Family name |
MIR-4864 (all species) |
|---|
| Seed |
AGCCAGA |
|---|
| Species |
European lancelet (Branchiostoma lanceolatum) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bfl-Mir-4864
|
|---|
| Node of Origin (locus) |
Branchiostoma
|
|---|
| Node of Origin (family) |
Branchiostoma
|
|---|
Genome context
(BraLan2) |
Sc0000184: 79044-79105 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGUGGAGAGAGAGAGCCCUGUCUCUGGUGUAGGGAGAUCGUCUCGGGCAUACAGUAUUGUCAGGUGCAUGUAGCCAGACCUGAUCUCCCUGCAGCGGCUGCAGUUCAAACAGCAUGUGGCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGUGGAGAGAGAGAGCC--| CU G UC G A GUAUUGU
CUGU CUG UGUAGGGAGAUCG UC GGC UACA \
GACG GGC ACGUCCCUCUAGU AG CCG AUGU C
AACGGUGUACGACAAACUU^ UC G CC A - ACGUGGA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Bla-Mir-4864_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGGAGAUCGUCUCGGGCAUACA -23
Get sequence
|
|---|
| Mature sequence |
Bla-Mir-4864_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UAGCCAGACCUGAUCUCCCUGC -62
Get sequence
|
|---|
