| MirGeneDB ID | Bla-Mir-4886 |
|---|
| Family name |
MIR-4886 (all species) |
|---|
| Seed |
UUGCCGA |
|---|
| Species |
European lancelet (Branchiostoma lanceolatum) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bfl-Mir-4886
|
|---|
| Node of Origin (locus) |
Branchiostoma
|
|---|
| Node of Origin (family) |
Branchiostoma
|
|---|
Genome context
(BraLan2) |
Sc0000119: 923837-923895 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUCGGCAGACUUCGUGUUCCUCCGGCCCCGUUCGAGACGGACUCGGCAGACGUUCGCGUCUCUCUUGUUUGCCGAACCCGUUUUGAAUGGGGUCGUGUGGAAAAAGCACCGAGGAGCAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCGGCAGACUUCGUGU- UC-| AC UUCGCG
UCC CGGCCCCGUUCGAGACGG UCGGCAGACG \
AGG GCUGGGGUAAGUUUUGCC AGCCGUUUGU U
UACGAGGAGCCACGAAAA UGU^ CA UCUCUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Bla-Mir-4886_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UUCGAGACGGACUCGGCAGACG -22
Get sequence
|
|---|
| Mature sequence |
Bla-Mir-4886_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUUGCCGAACCCGUUUUGAAUG -59
Get sequence
|
|---|
