| MirGeneDB ID | Bla-Novel-4 |
|---|
| Family name |
BLA-NOVEL-4 (all species) |
|---|
| Seed |
CCACUGU |
|---|
| Species |
European lancelet (Branchiostoma lanceolatum) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
|
|---|
| Node of Origin (locus) |
B. lanceolatum
|
|---|
| Node of Origin (family) |
B. lanceolatum
|
|---|
Genome context
(BraLan2) |
Sc0000096: 135421-135481 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUAGAUUCAUUUAACGUCAGCUUUCAUAAUUCCACUGUGUACCACCACCAUAAGACAUUUUAGAUAUCAUGGUGGUCUUACACAGUGGAAUUAUUUGAGUUAACCAAAUUGAAUAACCUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAGAUUCAUUUAACGUC--| UC CC AAGACAUU
AGCUU AUAAUUCCACUGUGUA ACCACCAU \
UUGAG UAUUAAGGUGACACAU UGGUGGUA U
UAUCCAAUAAGUUAAACCAA^ UU UC CUAUAGAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Bla-Novel-4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCCACUGUGUACCACCACCAUA -22
Get sequence
|
|---|
| Star sequence |
Bla-Novel-4_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UGGUGGUCUUACACAGUGGAAU -61
Get sequence
|
|---|
