| MirGeneDB ID | Bta-Mir-11989 |
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| Family name |
MIR-11989 (all species) |
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| Seed |
CCCAGGG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-11989
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037337.1: 20965616-20965670 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCACCCCUUUAGGUCCAGUCUGAUUGGUGCUCCCAGGGAUGUAGCUCCUAGUGCUGACCCUCCCUCUGGGGGCCCAUCCCUGCAGUGCCUUUCUUCCUGACGUGGAGUGUGGUGA
Get precursor sequence
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| Structure | 10 20 30 40 50
UCACCCCUUUAGGUCCAGUCU-| UU UG CC UA UGCUGA
GA GG CU CAGGGAUG GCUCCUAG C
CU CC GA GUCCCUAC CGGGGGUC C
AGUGGUGUGAGGUGCAGUCCUU^ UU GU C- C- UCCCUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-11989_5p |
| mirBase accession | MIMAT0046628 |
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| Sequence |
0- UCCCAGGGAUGUAGCUCCUAGUGC -24
Get sequence
|
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| Star sequence |
Bta-Mir-11989_3p* |
| mirBase accession | None |
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| Sequence |
34- UCUGGGGGCCCAUCCCUGCAG -55
Get sequence
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