| MirGeneDB ID | Bta-Mir-11995 |
|---|
| Family name |
MIR-11995 (all species) |
|---|
| Seed |
UAGCAGA |
|---|
| Species |
Cow (Bos taurus) |
|---|
| MiRBase ID |
bta-mir-11995
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
B. taurus
|
|---|
| Node of Origin (family) |
B. taurus
|
|---|
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037348.1: 2254585-2254643 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGAAAUAAAAAUAUAUAGAUGAACUCCACAUUGUCCUACUUCUCAGCUGUCUUGACUCCCUAACAAGAUAGCAGAGGAGUAGGAGGACAUGGAGUUCGUCUCUCCCUUCAAUGCAUCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGAAAUAAAAAUAUAUA--| CA G A UGACUC
GAUGAACUCCA UU UCCUACUUCUC GCUGUCU \
CUGCUUGAGGU AG AGGAUGAGGAG CGAUAGA C
AACUACGUAACUUCCCUCU^ AC G A ACAAUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Bta-Mir-11995_5p* |
| mirBase accession | MIMAT0046648 |
|---|
| Sequence |
0- UUGUCCUACUUCUCAGCUGUCU -22
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-11995_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AUAGCAGAGGAGUAGGAGGACA -59
Get sequence
|
|---|
