MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-2299

Family name MIR-2299 (all species)
Seed CUGGAUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-2299
Paralogues
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037339.1: 29635277-29635335 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGGUGUGUUUUCAAUGAUAACUGAACACACUGGAUUCAUUUCUCUGAAAGUGGAUUUUGUGGUCUGUCCGGGGAAUGGAUCCAGCGUGAUCGGUUGGAUGAGACGCGCCUGAAGGAU
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Structure
        10          20        30        40        50         
ACUGGUGUGUUUUCAAUGA--|      A   A               U  AAGUGGAUU 
                     UAACUGA CAC CUGGAUUCAUUUCUC GA         \
                     GUUGGCU GUG GACCUAGGUAAGGGG CU         U
UAGGAAGUCCGCGCAGAGUAG^      A   C               C  GUCUGGUGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2299_5p

mirBase accessionMIMAT0011807
Sequence
0- ACUGGAUUCAUUUCUCUGAAA -21
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Proposed targets TargetScanVert: bta-miR-2299-5p
Star sequence

Bta-Mir-2299_3p*

mirBase accessionMIMAT0011808
Sequence
38- UCCGGGGAAUGGAUCCAGCGU -59
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Proposed targets TargetScanVert: bta-miR-2299-3p