| MirGeneDB ID | Bta-Novel-2 |
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| Family name |
BTA-NOVEL-2 (all species) |
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| Seed |
CUGGUGG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037355.1: 33236705-33236762 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCCUGUGGCCAGACGGGAGGCAGCAGGGCCAGCCCUUCCCUUUCACUGGCCUGUAGCCAGCCCAGGUCUGGUGGGAAGGAAGGGACACAUCCUGAUGUCUGAGUGCCCUGCGAUCUCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCCUGUGGCCAGACGGG- G CCAG- C UU UG -| GUAGC
AGGCA CAGGG CCCUUCC U CAC G CCU \
UCUGU GUCCU GGGAAGG A GUG C GGA C
GCUCUAGCGUCCCGUGAG A ACACA A GG GU U^ CCCGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Novel-2_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCCCUUCCCUUUCACUGGCCU -22
Get sequence
|
|---|
| Mature sequence |
Bta-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UCUGGUGGGAAGGAAGGGACAC -58
Get sequence
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