MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-2221

Family name MIR-2221 (all species)
Seed AAGUGAU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-2221
Paralogues
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)
chrX: 1390879-1390939 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUUAUUCUUACUGUCCUCGAAUACAAACUGGCGGUUUGCAUUCACUUACAUUUAUAAGACAAAAAUGCAAGUGAUACCAGACCGCUAGUUUGUAAAAGGGAUAAUUUUAUGUGAAAUUC
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Structure
        10          20        30        40        50          
CAUUUAUUCUUACUGUC--|  GAA                 CAU      A  UUUAUAA 
                   CUC   UACAAACUGGCGGUUUG   UCACUU CA       \
                   GGG   AUGUUUGAUCGCCAGAC   AGUGAA GU       G
CUUAAAGUGUAUUUUAAUA^  AAA                 CAU      C  AAAAACA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-2221_5p*

mirBase accessionNone
Sequence
0- UGGCGGUUUGCAUUCACUUACA -22
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Mature sequence

Cel-Mir-2221_3p

mirBase accessionMIMAT0011463
Sequence
39- CAAGUGAUACCAGACCGCUAGU -61
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Proposed targets microrna.org: MIMAT0011463
TargetScanWorm: cel-miR-2221