MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-243

Family name MIR-243 (all species)
Seed AUCUCGG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-243
Paralogues
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)
chrIV: 4450798-4450861 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACAGAAAUUCUGUUCACGCAUAAGCCUGAUAUCUCGGUGCGAUCGUACCGUAUCGCUCACACUUAGAUUACGGUACGAUCGCGGCGGGAUAUCAGGUACGUGAUUGGAAGCUGUGCAAUUCUG
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Structure
        10          20        30        40        50        60 
CACAGAAAUUCUGUUCACG--|  AA             G               UCGCUCA 
                     CAU  GCCUGAUAUCUCG UGCGAUCGUACCGUA       C
                     GUG  UGGACUAUAGGGC GCGCUAGCAUGGCAU       A
GUCUUAACGUGUCGAAGGUUA^  CA             G               UAGAUUC 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-243_5p

mirBase accessionMIMAT0015117
Sequence
0- UAUCUCGGUGCGAUCGUACCGUA -23
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Proposed targets microrna.org: MIMAT0015117
Co-mature sequence

Cel-Mir-243_3p

mirBase accessionMIMAT0000299
Sequence
41- CGGUACGAUCGCGGCGGGAUAUC -64
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Proposed targets microrna.org: MIMAT0000299
TargetScanWorm: cel-miR-243