| MirGeneDB ID | Cel-Mir-4808 |
|---|
| Family name |
MIR-4808 (all species) |
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| Seed |
AGCUCUA |
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| Species |
Roundworm (Caenorhabditis elegans) |
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| MiRBase ID |
cel-mir-4808
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. elegans
|
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| Node of Origin (family) |
C. elegans
|
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Genome context
(ce11) |
chrX: 1872952-1873008 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GCUCCCCGUGUGCUUGCAUUGCUAAACAUGGUAAGAUAGAUUAGUGCUUUCAAUUAUUUCAAACGAAAGCUCUAUUCUCUCUUACAGAUAUUGAGAUCACGCAAAACAAGAUGAAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCUCCCCGUGUGCUUGCAUUGCUAAACAUG--| U U U AAUUAU
GUAAGA AGA UAG GCUUUC \
CAUUCU UCU AUC CGAAAG U
GAAAGUAGAACAAAACGCACUAGAGUUAUAGA^ C U U CAAACU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Cel-Mir-4808_5p* |
| mirBase accession | MIMAT0019991 |
|---|
| Sequence |
0- GUAAGAUAGAUUAGUGCUUUC -21
Get sequence
|
|---|
| Mature sequence |
Cel-Mir-4808_3p |
| mirBase accession | MIMAT0019992 |
|---|
| Sequence |
36- AAGCUCUAUUCUCUCUUACAG -57
Get sequence
|
|---|
