MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-4814

Family name MIR-4814 (all species)
Seed GGGCAAA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-4814
Paralogues
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)
chrIII: 13728430-13728495 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCGCCACUUUUAAACCAACUUUACCCACUUCUCAACCAACUUUGGCCACUUUUCAACUGCCAUUCACAGAAGUGGGCAAAGUUGGUUGAGAAGUGGGUAAAGUUGGGCAAAGUUGGUUAAAGUU
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Structure
        10          20        30        40        50        60  
CGGCGCCACUUUUAAAC--|                            G     UUUCAACUG 
                   CAACUUUACCCACUUCUCAACCAACUUUG CCACU         C
                   GUUGAAAUGGGUGAAGAGUUGGUUGAAAC GGUGA         C
UUGAAAUUGGUUGAAACGG^                            G     AGACACUUA 
    120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-4814_5p*

mirBase accessionMIMAT0020002
Sequence
0- UUCUCAACCAACUUUGGCCACU -22
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Mature sequence

Cel-Mir-4814_3p

mirBase accessionMIMAT0020003
Sequence
44- UGGGCAAAGUUGGUUGAGAAGU -66
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