MirGeneDB ID | Cel-Mir-4814 |
Family name |
MIR-4814 (all species) |
Seed |
GGGCAAA |
Species |
Roundworm (Caenorhabditis elegans) |
MiRBase ID |
cel-mir-4814
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
C. elegans
|
Node of Origin (family) |
C. elegans
|
Genome context (ce11) |
chrIII: 13728430-13728495 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGGCGCCACUUUUAAACCAACUUUACCCACUUCUCAACCAACUUUGGCCACUUUUCAACUGCCAUUCACAGAAGUGGGCAAAGUUGGUUGAGAAGUGGGUAAAGUUGGGCAAAGUUGGUUAAAGUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGGCGCCACUUUUAAAC--| G UUUCAACUG
CAACUUUACCCACUUCUCAACCAACUUUG CCACU C
GUUGAAAUGGGUGAAGAGUUGGUUGAAAC GGUGA C
UUGAAAUUGGUUGAAACGG^ G AGACACUUA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Cel-Mir-4814_5p* |
mirBase accession | MIMAT0020002 |
Sequence |
0- UUCUCAACCAACUUUGGCCACU -22
Get sequence
|
Mature sequence |
Cel-Mir-4814_3p |
mirBase accession | MIMAT0020003 |
Sequence |
44- UGGGCAAAGUUGGUUGAGAAGU -66
Get sequence
|