MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-799

Family name MIR-799 (all species)
Seed GAACCCU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-799
Paralogues
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)
chrX: 8600657-8600718 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAAAAUAUGUUAGUUUUUCAAUUUUUUUCACCGGUUUUAAAAAGUGGUUUCACAUUCAAUAAAGACAUGUGAACCCUGAUAAAGCUAGUGGAAAUAUCGGAAAACAUUGUUAGGAGCAUAU
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Structure
        10          20        30        40        50        60  
AUAAAAUAUGUUAGUUU--|  AAUUU       CG      AAA  U    U    UUCAAU 
                   UUC     UUUUCAC  GUUUUA   AG GGUU CACA      \
                   AAG     AAAGGUG  CGAAAU   UC CCAA GUGU      A
UAUACGAGGAUUGUUACAA^  GCUAU       AU      AG-  -    -    ACAGAA 
120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-799_5p*

mirBase accessionNone
Sequence
0- ACCGGUUUUAAAAAGUGGUUUCACA -25
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Mature sequence

Cel-Mir-799_3p

mirBase accessionMIMAT0004234
Sequence
40- UGAACCCUGAUAAAGCUAGUGG -62
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Proposed targets microrna.org: MIMAT0004234
TargetScanWorm: cel-miR-799