MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-86

Family name MIR-86 (all species)
Seed AAGUGAA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-86
Paralogues
Orthologues Asu-Mir-86  Cbr-Mir-86 
Node of Origin (locus) Chromadorea
Node of Origin (family) Chromadorea
Genome context
(ce11)
chrIII: 11936654-11936719 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUUAAAAGAGACACGUGUCCACGCCGUCUAAGUGAAUGCUUUGCCACAGUCUUCGAUGUUCUGAAAUGAAGCCUGGGCUCAGAUUCGCUUAGGCCGGAGUUUGACACGGCAUUUUUCUAAUAUC
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Structure
        10         20          30        40        50        60   
CCUUUAAAAGAGACACG-    C-  G  -|           G  UU   A   U UUCGAUGUU 
                  UGUC  AC CC GUCUAAGUGAAU CU  GCC CAG C         \
                  ACAG  UG GG CGGAUUCGCUUA GA  CGG GUC G         C
CUAUAAUCUUUUUACGGC    UU  A  C^           -  CU   -   C AAGUAAAGU 
    120       110       100        90         80         70
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsNo
Tissue expression
 +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-86_5p

mirBase accessionMIMAT0000059
Sequence
0- UAAGUGAAUGCUUUGCCACAGUC -23
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Proposed targets microrna.org: MIMAT0000059
TargetScanWorm: cel-miR-86
Star sequence

Cel-Mir-86_3p*

mirBase accessionMIMAT0020776
Sequence
44- CUGGGCUCAGAUUCGCUUAGGC -66
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