MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-1844

Family name MIR-1844 (all species)
Seed GGACUAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-1844
Paralogues
Orthologues
Node of Origin (locus) C. familiaris
Node of Origin (family) C. familiaris
Genome context
(canFam3_add)
chr9: 32760904-32760963 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUGCUUUGGUUCUCUCCUCGGUAAGGUGAGGACUACGGACGGGCUGAGCUUUCAGGCUCCCCACAGCUCUGCCCGACUCUGGUUCGCACCUCUCCGGGGUUCCAGGCACUCCCCCUCC
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Structure
        10          20        30        40        50         
CUGUGCUUUGGUUCUCU--|     UA     A      C  A     U     UUCAGG 
                   CCUCGG  AGGUG GGACUA GG CGGGC GAGCU      C
                   GGGGCC  UCCAC CUUGGU UC GCCCG CUCGA      U
CCUCCCCCUCACGGACCUU^     UC     G      C  A     U     CACCCC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-1844_5p

mirBase accessionMIMAT0006740
Sequence
0- AGGACUACGGACGGGCUGAGCU -22
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Proposed targets TargetScanVert: cfa-miR-1844
miRDB: MIMAT0006740
Co-mature sequence

Cfa-Mir-1844_3p

mirBase accessionNone
Sequence
38- CUCUGCCCGACUCUGGUUCGCA -60
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