| MirGeneDB ID | Cja-Mir-584 |
|---|---|
| Family name | MIR-584 (all species) |
| Seed | UCUGGUU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-584 Mml-Mir-584 Pab-Mir-584 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021916.1: 45807507-45807568 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUGGGAGAGUGACUUAGGGUGACCAGCCAUUCUGGUUUGUGUGGGACUGAGGAAUUUGCUGGGAUAUGUCAGUUCCAGGCCAACCAGGCUGGUUGGUCUCCCUGAAACAACCUUCUUGCUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 CAUGGGAGAGUGACUUA--| U UU U G GGAAUUUG GGG GACCAGCCA CUGGUU GU UGGGACUGA C CCC CUGGUUGGU GACCAA CG ACCUUGACU U UUCGUUCUUCCAACAAAGU^ U CG C G GUAUAGGG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-584_5p |
| mirBase accession | None |
| Sequence |
0- UUCUGGUUUGUGUGGGACUGA -21
Get sequence
|
| Star sequence | Cja-Mir-584_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- AGUUCCAGGCCAACCAGGCUG -62
Get sequence
|
