| MirGeneDB ID | Cja-Mir-584 |
|---|
| Family name |
MIR-584 (all species) |
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| Seed |
UCUGGUU |
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| Species |
White-tufted-ear marmoset (Callithrix jacchus) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-584
Mml-Mir-584
Pab-Mir-584
|
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| Node of Origin (locus) |
Simiiformes
|
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| Node of Origin (family) |
Simiiformes
|
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Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021916.1: 45807507-45807568 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CAUGGGAGAGUGACUUAGGGUGACCAGCCAUUCUGGUUUGUGUGGGACUGAGGAAUUUGCUGGGAUAUGUCAGUUCCAGGCCAACCAGGCUGGUUGGUCUCCCUGAAACAACCUUCUUGCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAUGGGAGAGUGACUUA--| U UU U G GGAAUUUG
GGG GACCAGCCA CUGGUU GU UGGGACUGA C
CCC CUGGUUGGU GACCAA CG ACCUUGACU U
UUCGUUCUUCCAACAAAGU^ U CG C G GUAUAGGG
120 110 100 90 80 70 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Cja-Mir-584_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUCUGGUUUGUGUGGGACUGA -21
Get sequence
|
|---|
| Star sequence |
Cja-Mir-584_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
41- AGUUCCAGGCCAACCAGGCUG -62
Get sequence
|
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