MirGeneDB ID | Cja-Mir-651 |
Family name |
MIR-651 (all species) |
Seed |
UUAGGAU |
Species |
White-tufted-ear marmoset (Callithrix jacchus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Hsa-Mir-651
Mml-Mir-651
Mmr-Mir-651
Pab-Mir-651
|
Node of Origin (locus) |
Primates
|
Node of Origin (family) |
Primates
|
Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 6802782-6802841 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCUAGAUCUACAGAAAGCUAUCACUGCUUUUUAGGAUAAGCUUGACUUUUGUUCAGAUAGAAAUGCAAAAGGUAAGUAUAUCCUAAAAGGCAAUGACAGUUGAAUGUGUUUCUCGCGUG
Get precursor sequence
|
Structure | 10 20 30 40 50
CCCUAGAUCUACAGAAA--| A C A A UUCAGA
GCU UCA UGCUUUUUAGGAUA GCUUG CUUUUG U
UGA AGU ACGGAAAAUCCUAU UGAAU GAAAAC A
GUGCGCUCUUUGUGUAAGU^ C A A G GUAAAG
. 110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Cja-Mir-651_5p (predicted) |
mirBase accession | None |
Sequence |
0- UUUAGGAUAAGCUUGACUUUUG -22
Get sequence
|
Star sequence |
Cja-Mir-651_3p* (predicted) |
mirBase accession | None |
Sequence |
38- AAAGGUAAGUAUAUCCUAAAAG -60
Get sequence
|