MirGeneDB 3.0

MirGeneDB ID

Cja-Mir-651

Family name MIR-651 (all species)
Seed UUAGGAU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-651  Mml-Mir-651  Mmr-Mir-651  Pab-Mir-651 
Node of Origin (locus) Primates
Node of Origin (family) Primates
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)
CM021937.1: 6802782-6802841 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCUAGAUCUACAGAAAGCUAUCACUGCUUUUUAGGAUAAGCUUGACUUUUGUUCAGAUAGAAAUGCAAAAGGUAAGUAUAUCCUAAAAGGCAAUGACAGUUGAAUGUGUUUCUCGCGUG
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Structure
        10          20        30        40        50         
CCCUAGAUCUACAGAAA--|  A   C              A     A      UUCAGA 
                   GCU UCA UGCUUUUUAGGAUA GCUUG CUUUUG      U
                   UGA AGU ACGGAAAAUCCUAU UGAAU GAAAAC      A
GUGCGCUCUUUGUGUAAGU^  C   A              A     G      GUAAAG 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Cja-Mir-651_5p (predicted)

mirBase accessionNone
Sequence
0- UUUAGGAUAAGCUUGACUUUUG -22
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Star sequence

Cja-Mir-651_3p* (predicted)

mirBase accessionNone
Sequence
38- AAAGGUAAGUAUAUCCUAAAAG -60
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