| MirGeneDB ID | Cli-Mir-1467 |
|---|
| Family name |
MIR-1467 (all species) |
|---|
| Seed |
UCACACC |
|---|
| Species |
Rock pigeon (Columba livia) |
|---|
| MiRBase ID |
cli-mir-1467
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Gga-Mir-1467
Tgu-Mir-1467
|
|---|
| Node of Origin (locus) |
Neognathae
|
|---|
| Node of Origin (family) |
Neognathae
|
|---|
Genome context
(colLiv2) |
scaffold216: 4187745-4187809 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGAAGGAAAAACCGACAGGGCAGGUUUUUCUCUCAGCUACGUCGGUGUAAAUCCAGAGCAACUCCACUGAGAUUCACACCAGAGUAACUGAGAGCAGAAUCUGGCCAACAUCAUCCACCUGACCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGAAGGAAAAACCGACA--| G U C G - A CAGAGCAA
GG CAGGUUUU CUCUCAG UAC UC GGUGU AAUC \
CC GUCUAAGA GAGAGUC AUG AG CCACA UUAG C
UCCAGUCCACCUACUACAA^ G C A - A C AGUCACCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Cli-Mir-1467_5p* |
| mirBase accession | MIMAT0038680 |
|---|
| Sequence |
0- UCUCAGCUACGUCGGUGUAAAUC -23
Get sequence
|
|---|
| Mature sequence |
Cli-Mir-1467_3p |
| mirBase accession | MIMAT0038681 |
|---|
| Sequence |
42- UUCACACCAGAGUAACUGAGAGC -65
Get sequence
|
|---|
