| MirGeneDB ID | Cli-Mir-9619 |
|---|
| Family name |
MIR-9619 (all species) |
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| Seed |
UUUGCCU |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9619
|
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| Paralogues |
|
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| Orthologues |
Tgu-Mir-9619
|
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| Node of Origin (locus) |
Neoaves
|
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| Node of Origin (family) |
Neoaves
|
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Genome context
(colLiv2) |
scaffold7: 6214561-6214617 [-]
|
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Precursor
(pre-Mir +30nt flank) |
GUUUUAUUGUCUGUUGUGAGCCUGAUCCAAUAUUCCUUAAGUAGGCAAAGUUGAUUCUUUCACAGUUUUGCCUGCUCAAGGGGUAGAGGAAUAGGCUCUAGGCCUGUGAAGUGUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUUUUAUUGUCUGUUGU--| A AA A GU GAUUC
GAGCCUG UCC UAUUCCUU AGUAGGCAAA U \
CUCGGAU AGG AUGGGGAA UCGUCCGUUU A U
AUUUGUGAAGUGUCCGGAU^ A AG C UG CACUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Star sequence |
Cli-Mir-9619_5p* |
| mirBase accession | MIMAT0038727 |
|---|
| Sequence |
0- UAUUCCUUAAGUAGGCAAAGUU -22
Get sequence
|
|---|
| Mature sequence |
Cli-Mir-9619_3p |
| mirBase accession | MIMAT0038728 |
|---|
| Sequence |
35- UUUUGCCUGCUCAAGGGGUAGA -57
Get sequence
|
|---|
