| MirGeneDB ID | Cli-Mir-9622 |
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| Family name |
MIR-9622 (all species) |
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| Seed |
CCGUCGG |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9622
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. livia
|
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| Node of Origin (family) |
C. livia
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Genome context
(colLiv2) |
scaffold79: 5422822-5422880 [+]
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Precursor
(pre-Mir +30nt flank) |
GGAGUCGGACCAGCCGUGGGGAAGAUGCCGUGGGGGUUUCCCUGCCUGGGACCCGAGGUGUGAAGGGCCCGUCGGGGCUGACCCCCAUGGCAGCUGGCUCCUUCGCUCAGCUGGAACUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGAGUCGGACCAGCCGU- A- A U-| CC A CCGAGG
GGGG AG UGCCGUGGGGGUU CCCUG UGGG C \
CCUC UC ACGGUACCCCCAG GGGGC GCCC G U
UUCAAGGUCGACUCGCUU GG G UC^ U- G GAAGUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Star sequence |
Cli-Mir-9622_5p* |
| mirBase accession | MIMAT0038735 |
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| Sequence |
0- UGGGGGUUUCCCUGCCUGGGAC -22
Get sequence
|
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| Mature sequence |
Cli-Mir-9622_3p |
| mirBase accession | MIMAT0038736 |
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| Sequence |
37- CCCGUCGGGGCUGACCCCCAUG -59
Get sequence
|
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