| MirGeneDB ID | Cli-Mir-9636 |
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| Family name |
MIR-9636 (all species) |
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| Seed |
GCAAAAC |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9636
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. livia
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| Node of Origin (family) |
C. livia
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Genome context
(colLiv2) |
scaffold1590: 232480-232547 [+]
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Precursor
(pre-Mir +30nt flank) |
GGUCGAACUGGAAACGUCGGCGCCGCUCCCCGCAAAACCAGUGGGUACCUUGUAGAAGGGACUGGUGGAGAGUGGACAAGUACCCGCUGGUUUGCUUGGGGAGGUGUCCGUGUUACUUCUUCAUAUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GGUCGAACUGGAAACGU- -| GC -- A C AGAAGGGACU
CGG CGCC UCCCC GCAAA CCAGUGGGUAC UUGU G
GCC GUGG AGGGG CGUUU GGUCGCCCAUG AACA G
UCUAUACUUCUUCAUUGU U^ -- UU - - GGUGAGAGGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Cli-Mir-9636_5p |
| mirBase accession | MIMAT0038765 |
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| Sequence |
0- CGCAAAACCAGUGGGUACCUUGUA -24
Get sequence
|
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| Co-mature sequence |
Cli-Mir-9636_3p |
| mirBase accession | MIMAT0038766 |
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| Sequence |
46- CAAGUACCCGCUGGUUUGCUUG -68
Get sequence
|
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