| MirGeneDB ID | Cli-Mir-9646 |
|---|
| Family name |
MIR-9646 (all species) |
|---|
| Seed |
AGAACAC |
|---|
| Species |
Rock pigeon (Columba livia) |
|---|
| MiRBase ID |
cli-mir-9646
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. livia
|
|---|
| Node of Origin (family) |
C. livia
|
|---|
Genome context
(colLiv2) |
scaffold10: 3459174-3459228 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAAAUUUUUGUCUUAGAGUGGUAUUUAGACCGAUUGUUGGUAGUGUUCUUUAUAAAAACGAUAAAGAACACUACCAACGACCGGUCUAAAUGCCACUUAUCGUAUAGGAGAAGCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAAAUUUUUGUCUUAGA--| A UAAA
GUGGUAUUUAGACCG UUGUUGGUAGUGUUCUUUA \
CACCGUAAAUCUGGC AGCAACCAUCACAAGAAAU A
GCGAAGAGGAUAUGCUAUU^ C AGCA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Cli-Mir-9646_5p* |
| mirBase accession | MIMAT0038785 |
|---|
| Sequence |
0- CGAUUGUUGGUAGUGUUCUUUA -22
Get sequence
|
|---|
| Mature sequence |
Cli-Mir-9646_3p |
| mirBase accession | MIMAT0038786 |
|---|
| Sequence |
33- AAGAACACUACCAACGACCGGU -55
Get sequence
|
|---|
