MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-153-P4

Family name MIR-153 (all species)
Seed UGCAUAG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-153-P1  Cmi-Mir-153-P2 
Orthologues Agr-Mir-153  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Cin-Mir-153  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dpu-Mir-153  Eba-Mir-153  Egr-Mir-153  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Isc-Mir-153  Lan-Mir-153  Lgi-Mir-153  Llo-Mir-153  Mgi-Mir-153  Mom-Mir-153  Npo-Mir-153  Obi-Mir-153  Ofu-Mir-153  Ovu-Mir-153  Pau-Mir-153  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Pve-Mir-153  Rph-Mir-153  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spu-Mir-153  Sto-Mir-153-P4  Tur-Mir-153  War-Mir-153  Xbo-Mir-153 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636116.1: 298946-299005 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCGGGAUUAGCCUCGCCAGCUGCCGGUGUCAUUUUUGUGAUUUGCAGCUUGUGUGUGUCAGCUCAGUUGCAUAGUCACAAAAGUGAUCACCGUUCGCUGUAUCUCUCUUCUCUCCCCU
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Structure
        10         20        30         40         50         
CCGCGGGAUUAGCCUCGC-    UGC     -              -|      UGUGUGU 
                   CAGC   CGGUG UCAUUUUUGUGAUU UGCAGCU       \
                   GUCG   GCCAC AGUGAAAACACUGA ACGUUGA       G
UCCCCUCUCUUCUCUCUAU    CUU     U              U^      CUCGACU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-153-P4_5p*
mirBase accessionNone
Sequence 
0- UCAUUUUUGUGAUUUGCAGCU -21
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Mature sequence

Cmi-Mir-153-P4_3p
mirBase accessionNone
Sequence 
38- UUGCAUAGUCACAAAAGUGAUC -60
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