MirGeneDB 2.1

MirGeneDB ID

Cmi-Mir-203-P6-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-203-P5-v1  Cmi-Mir-203-P5-v2  Cmi-Mir-203-P6-v2 
Orthologues Lch-Mir-203  Spt-Mir-203 
Node of Origin (locus) C. milii
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)
KI635863.1: 10840677-10840736 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUGUAUUGUGUGAAAGUCCUUUGGGUGCAGUGGUUUUCAACAGUUCAACAGUUCUUUAUUAACAUUGUGAAAUGUUUAGGACCACUUGAUCCAAAGAACAAUUACAUCAAACACACCU
Get precursor sequence
Structure
        10          20        30        40        50          
CAAUGUAUUGUGUGAAA--| C        GC         C    G    A   UUCUUU 
                   GU CUUUGGGU  AGUGGUUUU AACA UUCA CAG      \
                   CA GAAACCUA  UCACCAGGA UUGU AAGU GUU      A
UCCACACAAACUACAUUAA^ A        GU         U    A    -   ACAAUU 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Star sequence

Cmi-Mir-203-P6-v1_5p*

mirBase accessionNone
Sequence
0- AGUGGUUUUCAACAGUUCAACAG -23
Get sequence
Mature sequence

Cmi-Mir-203-P6-v1_3p

mirBase accessionNone
Sequence
38- GUGAAAUGUUUAGGACCACUUG -60
Get sequence